STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C807_01951Hypothetical protein. (67 aa)    
Predicted Functional Partners:
C807_00190
Hypothetical protein.
   
 
 0.907
C807_01418
Hypothetical protein.
   
 
 0.902
C807_01952
Hypothetical protein.
  
  
 0.896
C807_00945
Hypothetical protein.
   
 
 0.828
C807_01953
Hypothetical protein.
       0.752
C807_01954
PadR family transcriptional regulator, regulatory protein PadR.
       0.750
C807_00944
Hypothetical protein.
   
 
 0.746
C807_01593
Hypothetical protein.
   
 
 0.746
C807_02440
PAS domain S-box protein.
   
 
 0.746
C807_03871
Hypothetical protein.
   
 
 0.746
Your Current Organism:
Lachnospiraceae bacterium 284
NCBI taxonomy Id: 397287
Other names: L. bacterium 28-4, Lachnospiraceae bacterium 28-4
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.