STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C807_02027Hypothetical protein. (595 aa)    
Predicted Functional Partners:
C807_02023
Hypothetical protein.
 
 
 0.878
C807_01524
Hypothetical protein.
 
 
  0.817
C807_03776
Hypothetical protein.
 
 
  0.817
C807_00239
Hypothetical protein.
 
 
  0.811
C807_03988
Hypothetical protein.
 
 
  0.811
C807_00574
Hypothetical protein.
 
 
  0.807
C807_01540
Hypothetical protein.
 
 
  0.805
C807_00331
Hypothetical protein.
 
 
  0.797
C807_00166
Hypothetical protein.
 
 
 0.791
C807_03308
Hypothetical protein.
 
  
 
0.768
Your Current Organism:
Lachnospiraceae bacterium 284
NCBI taxonomy Id: 397287
Other names: L. bacterium 28-4, Lachnospiraceae bacterium 28-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.