Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C807_02049Hypothetical protein. (160 aa)    
Predicted Functional Partners:
C807_03889
Hypothetical protein.
  
     0.639
C807_00083
Hypothetical protein.
  
     0.592
C807_01400
Hypothetical protein.
    
 0.544
C807_03011
Hypothetical protein.
  
     0.502
argB
Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily.
 
  
 0.472
C807_00795
Diaminopimelate decarboxylase.
   
  0.469
C807_00979
Hypothetical protein.
 
  
  0.465
C807_02050
Hypothetical protein.
       0.455
C807_03047
Hypothetical protein.
  
 
  0.455
C807_01810
Chorismate mutase.
    
  0.450
Your Current Organism:
Lachnospiraceae bacterium 284
NCBI taxonomy Id: 397287
Other names: L. bacterium 28-4, Lachnospiraceae bacterium 28-4
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