Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C807_02299TDP-4-keto-6-deoxy-D-glucose transaminase; Belongs to the DegT/DnrJ/EryC1 family. (376 aa)    
Predicted Functional Partners:
C807_02119
Undecaprenyl-phosphate glucose phosphotransferase.
  
 
 0.932
C807_02297
Hypothetical protein.
 
    0.870
C807_02294
Hypothetical protein.
  
 
 0.868
C807_02306
Hypothetical protein.
 
 
 0.793
C807_02241
Hypothetical protein.
  
 
 0.787
C807_02138
dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
 
 
 0.785
C807_02217
Hypothetical protein.
 
 
 0.780
C807_02296
Hypothetical protein.
       0.773
C807_02298
Hypothetical protein.
       0.773
C807_02312
UDP-N-acetylglucosamine 4,6-dehydratase.
  
 
 0.765
Your Current Organism:
Lachnospiraceae bacterium 284
NCBI taxonomy Id: 397287
Other names: L. bacterium 28-4, Lachnospiraceae bacterium 28-4
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