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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C807_02311UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase; Belongs to the DegT/DnrJ/EryC1 family. (400 aa)    
Predicted Functional Partners:
C807_02312
UDP-N-acetylglucosamine 4,6-dehydratase.
 
 
 0.977
C807_02309
Pseudaminic acid biosynthesis-associated protein PseG.
 
  
 0.944
C807_02307
Pseudaminic acid synthase.
 
  
 0.883
C807_02138
dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
 
 
 0.879
C807_02119
Undecaprenyl-phosphate glucose phosphotransferase.
 
 
 0.855
C807_02310
Hypothetical protein.
  
    0.802
C807_02308
Pseudaminic acid CMP-transferase.
 
  
 0.799
C807_02294
Hypothetical protein.
 
 
 0.772
C807_02848
Glycerol-3-phosphate cytidylyltransferase.
 
 
 0.756
C807_01441
Hypothetical protein.
 
 
 0.754
Your Current Organism:
Lachnospiraceae bacterium 284
NCBI taxonomy Id: 397287
Other names: L. bacterium 28-4, Lachnospiraceae bacterium 28-4
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