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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C807_02320Hypothetical protein. (272 aa)    
Predicted Functional Partners:
C807_02321
Hypothetical protein.
 
    0.840
C807_02322
Hypothetical protein.
 
 
 0.791
C807_02310
Hypothetical protein.
  
     0.750
C807_02324
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
 
  
 0.745
C807_02263
Hypothetical protein.
  
     0.736
C807_02317
Hypothetical protein.
 
    0.718
C807_02839
Hypothetical protein.
  
     0.718
fcl
Hypothetical protein; Catalyzes the two-step NADP-dependent conversion of GDP-4- dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction.
 
 
  0.716
C807_02318
Hypothetical protein.
 
    0.713
C807_02325
Hypothetical protein.
 
    
0.695
Your Current Organism:
Lachnospiraceae bacterium 284
NCBI taxonomy Id: 397287
Other names: L. bacterium 28-4, Lachnospiraceae bacterium 28-4
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