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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C807_02374Hypothetical protein. (66 aa)    
Predicted Functional Partners:
C807_03639
Hypothetical protein.
   
 
 0.879
C807_02565
Hypothetical protein.
   
 
 0.848
C807_02375
Hypothetical protein.
 
     0.845
C807_02376
Hypothetical protein.
       0.574
C807_02377
Hypothetical protein.
       0.574
C807_02378
C-terminal processing peptidase; Belongs to the peptidase S41A family.
       0.559
C807_02379
Hypothetical protein.
       0.531
C807_02372
Hypothetical protein.
       0.489
C807_02373
Hypothetical protein.
       0.489
C807_02380
Hypothetical protein; Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation. Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
       0.431
Your Current Organism:
Lachnospiraceae bacterium 284
NCBI taxonomy Id: 397287
Other names: L. bacterium 28-4, Lachnospiraceae bacterium 28-4
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