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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C807_02446Hypothetical protein; Belongs to the binding-protein-dependent transport system permease family. (320 aa)    
Predicted Functional Partners:
C807_02447
Hypothetical protein.
 0.977
C807_02448
Hypothetical protein.
 
 0.964
C807_03246
Hypothetical protein.
 0.938
C807_00420
Hypothetical protein.
 0.931
C807_00168
Hypothetical protein.
 0.925
C807_02177
Hypothetical protein.
 
 0.919
C807_00272
Hypothetical protein.
 0.918
C807_03245
Hypothetical protein.
 0.917
C807_00274
Hypothetical protein.
 
 0.914
rbsA
Ribose transport system ATP-binding protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 0.909
Your Current Organism:
Lachnospiraceae bacterium 284
NCBI taxonomy Id: 397287
Other names: L. bacterium 28-4, Lachnospiraceae bacterium 28-4
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