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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C807_02468PTS system, lactose/cellobiose family IIC component; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane. (415 aa)    
Predicted Functional Partners:
C807_02467
PTS system, cellobiose-specific IIA component.
 
 
 0.982
C807_02469
PTS system, cellobiose-specific IIB component.
 
 
 0.982
C807_03426
Hypothetical protein.
 
 
 0.966
C807_02772
Hypothetical protein.
 
 
 0.964
C807_03427
Hypothetical protein.
 
 
 0.964
C807_02768
Hypothetical protein.
 
 
 0.927
C807_02470
Hypothetical protein.
 
  
 0.906
C807_03422
Hypothetical protein.
 
 
 0.896
C807_02466
6-phospho-beta-glucosidase; Belongs to the glycosyl hydrolase 1 family.
  
 
 0.878
C807_02773
Hypothetical protein.
 
   
 0.821
Your Current Organism:
Lachnospiraceae bacterium 284
NCBI taxonomy Id: 397287
Other names: L. bacterium 28-4, Lachnospiraceae bacterium 28-4
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