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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C807_02498Hypothetical protein; Belongs to the binding-protein-dependent transport system permease family. (329 aa)    
Predicted Functional Partners:
C807_02499
Hypothetical protein.
 
 0.975
C807_02500
Hypothetical protein.
 
 
 0.955
C807_00170
Methyl-galactoside transport system ATP-binding protein.
 
 0.893
C807_00272
Hypothetical protein.
 
 0.888
C807_03246
Hypothetical protein.
 
 0.887
C807_03245
Hypothetical protein.
 
 0.882
C807_00169
Methyl-galactoside transport system substrate-binding protein.
 
 
 0.869
rbsA
Ribose transport system ATP-binding protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 
 0.866
C807_03230
Hypothetical protein.
 
 0.861
C807_03786
Hypothetical protein.
 
 0.857
Your Current Organism:
Lachnospiraceae bacterium 284
NCBI taxonomy Id: 397287
Other names: L. bacterium 28-4, Lachnospiraceae bacterium 28-4
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