STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C807_02500Hypothetical protein. (389 aa)    
Predicted Functional Partners:
C807_00190
Hypothetical protein.
  
 0.987
C807_01418
Hypothetical protein.
   
 0.961
C807_02498
Hypothetical protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.955
C807_02499
Hypothetical protein.
 
 0.934
C807_00945
Hypothetical protein.
   
 0.930
C807_00944
Hypothetical protein.
   
 0.920
C807_01593
Hypothetical protein.
   
 0.920
C807_02440
PAS domain S-box protein.
   
 0.920
C807_03871
Hypothetical protein.
   
 0.920
C807_00171
Methyl-galactoside transport system permease.
 
 
 0.908
Your Current Organism:
Lachnospiraceae bacterium 284
NCBI taxonomy Id: 397287
Other names: L. bacterium 28-4, Lachnospiraceae bacterium 28-4
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.