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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C807_02588Hypothetical protein. (605 aa)    
Predicted Functional Partners:
C807_02587
Hypothetical protein.
 
     0.715
C807_02589
Hypothetical protein.
 
     0.627
C807_02586
Hypothetical protein.
       0.575
C807_02585
Aminotransferase.
       0.511
C807_00469
Hypothetical protein.
  
     0.499
C807_03196
Hypothetical protein.
  
     0.482
minE
Cell division topological specificity factor MinE; Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell.
  
     0.445
C807_01813
Hypothetical protein.
 
     0.426
C807_01934
Stage V sporulation protein AC.
   
    0.410
C807_02045
Hypothetical protein.
 
     0.400
Your Current Organism:
Lachnospiraceae bacterium 284
NCBI taxonomy Id: 397287
Other names: L. bacterium 28-4, Lachnospiraceae bacterium 28-4
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