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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C807_02721Multiple sugar transport system permease; Overlaps another CDS with the same product name. (292 aa)    
Predicted Functional Partners:
C807_02720
Multiple sugar transport system permease; Overlaps another CDS with the same product name.
 
 0.989
C807_02722
Hypothetical protein.
 
  0.983
C807_03289
Maltose/maltodextrin transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.978
C807_00212
Hypothetical protein.
 
 0.948
C807_01235
Multiple sugar transport system permease; Overlaps another CDS with the same product name.
 
 0.939
C807_03403
Hypothetical protein.
 
 0.938
C807_03285
Hypothetical protein.
 
 0.929
C807_01991
Hypothetical protein.
 
 0.919
C807_02024
Hypothetical protein.
 
 0.919
C807_01130
Hypothetical protein.
 
 0.911
Your Current Organism:
Lachnospiraceae bacterium 284
NCBI taxonomy Id: 397287
Other names: L. bacterium 28-4, Lachnospiraceae bacterium 28-4
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