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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C807_02763Hypothetical protein. (197 aa)    
Predicted Functional Partners:
C807_00156
Hypothetical protein.
 
    0.709
C807_00654
Flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family.
    
 
 0.681
C807_00499
Hypothetical protein.
   
   0.661
C807_01309
Hypothetical protein.
   
   0.661
C807_03235
Single-stranded DNA-binding protein.
   
   0.661
C807_00599
Oxaloacetate decarboxylase, alpha subunit.
  
    0.634
C807_04030
Hypothetical protein.
  
    0.629
ung
uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine.
     
 0.618
C807_00722
Hypothetical protein.
  
    0.615
C807_03681
Universal bacterial protein YeaZ.
  
    0.579
Your Current Organism:
Lachnospiraceae bacterium 284
NCBI taxonomy Id: 397287
Other names: L. bacterium 28-4, Lachnospiraceae bacterium 28-4
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