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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C807_02831Hypothetical protein. (266 aa)    
Predicted Functional Partners:
C807_02834
Hypothetical protein; Belongs to the DegT/DnrJ/EryC1 family.
    
  0.814
C807_02832
Hypothetical protein.
 
     0.803
C807_01389
Anaerobic ribonucleoside-triphosphate reductase.
    
  0.796
C807_02833
Hypothetical protein.
  
    0.785
C807_02830
Hypothetical protein.
 
   
0.720
C807_02846
Hypothetical protein.
 
  
0.658
C807_02828
FkbM family methyltransferase.
  
    0.652
C807_02829
Hypothetical protein.
 
    
0.651
C807_02835
Hypothetical protein.
       0.614
C807_02827
Hypothetical protein.
 
     0.601
Your Current Organism:
Lachnospiraceae bacterium 284
NCBI taxonomy Id: 397287
Other names: L. bacterium 28-4, Lachnospiraceae bacterium 28-4
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