Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C807_03131Multiple sugar transport system permease. (293 aa)    
Predicted Functional Partners:
C807_03133
Carbohydrate ABC transporter substrate-binding protein.
 
 0.997
C807_03132
Multiple sugar transport system permease.
 
 0.986
C807_03289
Maltose/maltodextrin transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.951
C807_03329
Multiple sugar transport system permease.
 
 0.915
C807_01131
Hypothetical protein.
 
 0.911
C807_03404
Hypothetical protein.
 
 0.911
C807_02025
Hypothetical protein.
 
 0.905
C807_02884
Multiple sugar transport system permease.
 
 0.894
C807_01992
Hypothetical protein.
 
 0.892
C807_03129
1,3-beta-galactosyl-N-acetylhexosamine phosphorylase.
 
     0.887
Your Current Organism:
Lachnospiraceae bacterium 284
NCBI taxonomy Id: 397287
Other names: L. bacterium 28-4, Lachnospiraceae bacterium 28-4
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