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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C807_03145Hypothetical protein. (311 aa)    
Predicted Functional Partners:
C807_02955
Glutamine-fructose-6-phosphate transaminase (isomerizing).
  
 
 0.769
C807_03146
Hypothetical protein.
 
   
 0.732
C807_01780
N-acetylglucosamine-6-phosphate deacetylase.
 
  
 0.731
C807_02992
Hypothetical protein.
    
 0.714
C807_02993
N-acetylglucosamine-6-phosphate deacetylase.
 
  
 0.696
nagB
Glucosamine-6-phosphate deaminase; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion.
 
 
 0.669
C807_01781
Hypothetical protein.
  
 
 0.626
C807_03144
Hypothetical protein.
       0.620
C807_01234
Hypothetical protein.
    
 0.612
glmM
Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.
   
 
 0.607
Your Current Organism:
Lachnospiraceae bacterium 284
NCBI taxonomy Id: 397287
Other names: L. bacterium 28-4, Lachnospiraceae bacterium 28-4
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