Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
C807_03213Formate acetyltransferase. (679 aa)    
Predicted Functional Partners:
C807_03215
Formate acetyltransferase.
     0.987
C807_03216
Pyruvate formate-lyase 1-activating enzyme; Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine; Belongs to the organic radical-activating enzymes family.
 
 0.977
C807_00849
Formate acetyltransferase.
 
     0.976
C807_02744
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
    
 0.960
C807_00375
Glycyl-radical enzyme activating protein family.
 
 
 0.932
C807_00823
Phosphate acetyltransferase.
   
 
 0.879
C807_03630
Pyruvate kinase; Belongs to the pyruvate kinase family.
   
 
 0.863
C807_00386
Propionaldehyde dehydrogenase.
  
 
 0.828
C807_02186
Hypothetical protein; Belongs to the aldehyde dehydrogenase family.
  
 
 0.821
proC
Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.
    
 0.812
Your Current Organism:
Lachnospiraceae bacterium 284
NCBI taxonomy Id: 397287
Other names: L. bacterium 28-4, Lachnospiraceae bacterium 28-4
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