STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C807_03301Transketolase; Overlaps another CDS with the same product name. (275 aa)    
Predicted Functional Partners:
C807_03299
Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
  
 0.999
C807_03300
Transketolase; Overlaps another CDS with the same product name.
 0.999
C807_03202
RpiB/LacA/LacB family sugar-phosphate isomerase.
 
  
 0.939
C807_01810
Chorismate mutase.
    
  0.920
C807_03630
Pyruvate kinase; Belongs to the pyruvate kinase family.
   
 
 0.896
C807_00207
PTS system, glucose-like IIB component.
    
 0.893
C807_00370
PTS system, maltose and glucose-specific subfamily, IIC component.
    
 0.893
C807_01432
PTS system, glucose subfamily, IIA component.
    
 0.893
C807_01641
PTS system, beta-glucoside-specific IIABC component.
    
 0.893
pfp
Hypothetical protein; Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP- PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions.
    
  0.893
Your Current Organism:
Lachnospiraceae bacterium 284
NCBI taxonomy Id: 397287
Other names: L. bacterium 28-4, Lachnospiraceae bacterium 28-4
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