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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C807_03339Type I restriction enzyme, S subunit. (191 aa)    
Predicted Functional Partners:
C807_03341
Type I restriction-modification system, M subunit.
 
 0.996
C807_03337
HsdR family type I site-specific deoxyribonuclease; Subunit R is required for both nuclease and ATPase activities, but not for modification.
 
  
 0.983
C807_02165
Hypothetical protein.
 
 
 0.969
C807_01750
Type I restriction-modification system, M subunit.
 
 
 0.947
C807_02064
Type I restriction-modification system, M subunit.
  
 
 0.935
C807_03340
Hypothetical protein.
   
0.922
C807_01171
Hypothetical protein.
  
 
 0.822
C807_02000
Hypothetical protein.
  
 
 0.822
C807_02166
Hypothetical protein.
  
 
 0.822
C807_03323
Hypothetical protein.
  
 
 0.822
Your Current Organism:
Lachnospiraceae bacterium 284
NCBI taxonomy Id: 397287
Other names: L. bacterium 28-4, Lachnospiraceae bacterium 28-4
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