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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C807_03363Hypothetical protein. (130 aa)    
Predicted Functional Partners:
metN
Hypothetical protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
    
   0.697
C807_02401
Hypothetical protein; Belongs to the Fur family.
  
  
 0.528
C807_02758
Hypothetical protein; Belongs to the Fur family.
  
  
 0.528
C807_03150
Hypothetical protein; Belongs to the Fur family.
  
  
 0.528
C807_03375
Hypothetical protein.
 
  
 0.505
C807_03361
Hypothetical protein.
 
    
0.486
C807_03362
Hypothetical protein.
     
 0.469
C807_01844
Hypothetical protein.
 
  
 0.467
minE
Cell division topological specificity factor MinE; Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell.
   
    0.457
C807_01123
Signal peptidase I; Belongs to the peptidase S26 family.
   
    0.457
Your Current Organism:
Lachnospiraceae bacterium 284
NCBI taxonomy Id: 397287
Other names: L. bacterium 28-4, Lachnospiraceae bacterium 28-4
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