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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C807_03376Flavodoxin. (140 aa)    
Predicted Functional Partners:
C807_03377
Hypothetical protein.
 
   
 0.914
C807_02744
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
     
 0.773
C807_00360
Hypothetical protein.
    
  0.700
C807_03375
Hypothetical protein.
 
     0.629
C807_00685
Chemotaxis protein CheC.
    
   0.598
C807_02102
Cysteine synthase A; Belongs to the cysteine synthase/cystathionine beta- synthase family.
   
 
  0.533
C807_03364
HAD ATPase, P-type, family IC.
 
     0.523
C807_02563
Hypothetical protein.
  
 
  0.471
C807_03374
Ferrous iron transporter A.
 
     0.430
rnfB
Electron transport complex, rnfabcdge type, B subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.
    
 0.419
Your Current Organism:
Lachnospiraceae bacterium 284
NCBI taxonomy Id: 397287
Other names: L. bacterium 28-4, Lachnospiraceae bacterium 28-4
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