Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
C807_00190 | C807_00933 | Hypothetical protein. | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.999 |
C807_00190 | C807_00945 | Hypothetical protein. | Hypothetical protein. | 0.999 |
C807_00190 | C807_01418 | Hypothetical protein. | Hypothetical protein. | 0.998 |
C807_00190 | C807_02749 | Hypothetical protein. | C_GCAxxG_C_C family protein. | 0.999 |
C807_00190 | C807_03170 | Hypothetical protein. | Hypothetical protein. | 0.999 |
C807_00190 | C807_03410 | Hypothetical protein. | Hypothetical protein. | 0.977 |
C807_00190 | C807_03740 | Hypothetical protein. | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.999 |
C807_00190 | C807_03746 | Hypothetical protein. | 3-hydroxybutyryl-CoA dehydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.993 |
C807_00933 | C807_00190 | Diguanylate cyclase (GGDEF) domain-containing protein. | Hypothetical protein. | 0.999 |
C807_00933 | C807_00945 | Diguanylate cyclase (GGDEF) domain-containing protein. | Hypothetical protein. | 0.998 |
C807_00933 | C807_01418 | Diguanylate cyclase (GGDEF) domain-containing protein. | Hypothetical protein. | 0.998 |
C807_00933 | C807_02749 | Diguanylate cyclase (GGDEF) domain-containing protein. | C_GCAxxG_C_C family protein. | 0.997 |
C807_00933 | C807_03170 | Diguanylate cyclase (GGDEF) domain-containing protein. | Hypothetical protein. | 0.998 |
C807_00933 | C807_03410 | Diguanylate cyclase (GGDEF) domain-containing protein. | Hypothetical protein. | 0.822 |
C807_00933 | C807_03740 | Diguanylate cyclase (GGDEF) domain-containing protein. | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.999 |
C807_00933 | C807_03746 | Diguanylate cyclase (GGDEF) domain-containing protein. | 3-hydroxybutyryl-CoA dehydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.869 |
C807_00945 | C807_00190 | Hypothetical protein. | Hypothetical protein. | 0.999 |
C807_00945 | C807_00933 | Hypothetical protein. | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.998 |
C807_00945 | C807_01418 | Hypothetical protein. | Hypothetical protein. | 0.998 |
C807_00945 | C807_02749 | Hypothetical protein. | C_GCAxxG_C_C family protein. | 0.999 |
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