C807_03456 protein (Lachnospiraceae bacterium 284)

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Score

C807_03456

Hypothetical protein; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family. (79 aa)

Predicted Functional Partners:

rnpA

0.991

C807_03457

0.941

C807_03458

0.896

secE

0.893

rpmH

0.873

C807_00972

0.845

C807_03468

0.840

rho

0.701

metG

0.680

rplB

0.663

Your Current Organism:

Lachnospiraceae bacterium 284

NCBI taxonomy Id: 397287
Other names: L. bacterium 28-4, Lachnospiraceae bacterium 28-4

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C807_00972	C807_03456	C807_00972	C807_03456	RsmD family RNA methyltransferase.	Hypothetical protein; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family.	0.845
C807_00972	rnpA	C807_00972	C807_03455	RsmD family RNA methyltransferase.	Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.	0.522
C807_03456	C807_00972	C807_03456	C807_00972	Hypothetical protein; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family.	RsmD family RNA methyltransferase.	0.845
C807_03456	C807_03457	C807_03456	C807_03457	Hypothetical protein; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family.	YidC/Oxa1 family membrane protein insertase.	0.941
C807_03456	C807_03458	C807_03456	C807_03458	Hypothetical protein; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family.	spoIIIJ-associated protein.	0.896
C807_03456	C807_03468	C807_03456	C807_03468	Hypothetical protein; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family.	serine-tRNA ligase.	0.840
C807_03456	metG	C807_03456	C807_03296	Hypothetical protein; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family.	methionine-tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.	0.680
C807_03456	rho	C807_03456	C807_01244	Hypothetical protein; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family.	Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template.	0.701
C807_03456	rnpA	C807_03456	C807_03455	Hypothetical protein; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family.	Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.	0.991
C807_03456	rplB	C807_03456	C807_03853	Hypothetical protein; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family.	50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	0.663
C807_03456	rpmH	C807_03456	C807_03454	Hypothetical protein; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family.	50S ribosomal protein L34; Belongs to the bacterial ribosomal protein bL34 family.	0.873
C807_03456	secE	C807_03456	C807_03925	Hypothetical protein; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family.	Preprotein translocase, SecE subunit; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.	0.893
C807_03457	C807_03456	C807_03457	C807_03456	YidC/Oxa1 family membrane protein insertase.	Hypothetical protein; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family.	0.941
C807_03457	C807_03458	C807_03457	C807_03458	YidC/Oxa1 family membrane protein insertase.	spoIIIJ-associated protein.	0.968
C807_03457	metG	C807_03457	C807_03296	YidC/Oxa1 family membrane protein insertase.	methionine-tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.	0.723
C807_03457	rho	C807_03457	C807_01244	YidC/Oxa1 family membrane protein insertase.	Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template.	0.883
C807_03457	rnpA	C807_03457	C807_03455	YidC/Oxa1 family membrane protein insertase.	Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.	0.977
C807_03457	rplB	C807_03457	C807_03853	YidC/Oxa1 family membrane protein insertase.	50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	0.877
C807_03457	rpmH	C807_03457	C807_03454	YidC/Oxa1 family membrane protein insertase.	50S ribosomal protein L34; Belongs to the bacterial ribosomal protein bL34 family.	0.849
C807_03457	secE	C807_03457	C807_03925	YidC/Oxa1 family membrane protein insertase.	Preprotein translocase, SecE subunit; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.	0.995