Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C807_03466Hypothetical protein. (171 aa)    
Predicted Functional Partners:
C807_00190
Hypothetical protein.
   
 0.841
C807_03467
Hypothetical protein.
   
   0.729
C807_03465
ParB-like partition protein; Belongs to the ParB family.
  
 
 0.713
C807_00912
Hypothetical protein; Belongs to the DEAD box helicase family.
   
 0.700
C807_01418
Hypothetical protein.
    
 0.688
C807_00233
Hypothetical protein.
    
 0.660
C807_03468
serine-tRNA ligase.
  
    0.657
C807_03469
Hypothetical protein.
 
     0.647
C807_00945
Hypothetical protein.
    
 0.635
C807_00970
DNA gyrase, B subunit.
   
 
 0.624
Your Current Organism:
Lachnospiraceae bacterium 284
NCBI taxonomy Id: 397287
Other names: L. bacterium 28-4, Lachnospiraceae bacterium 28-4
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.