Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C807_03596Hypothetical protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. (390 aa)    
Predicted Functional Partners:
C807_02870
Flagellar protein FliS.
 
 
 0.975
C807_03597
Flagellar protein FliS.
  
 
 0.968
C807_02876
Flagellar hook-associated protein FlgK; Belongs to the flagella basal body rod proteins family.
 
 
 0.966
C807_02877
Flagellar hook-associated protein FlgK.
 
 
 0.966
C807_00665
Flagellar hook-basal body protein.
 
 
 0.963
C807_00653
Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
 
 
 0.938
C807_00654
Flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family.
 
  
 0.934
C807_00670
Flagellar motor switch protein FliM.
 
  
 0.933
C807_00663
Hypothetical protein; Required for flagellar hook formation. May act as a scaffolding protein.
 
 
 0.925
C807_00659
Flagellar protein export ATPase FliI.
 
 
 0.923
Your Current Organism:
Lachnospiraceae bacterium 284
NCBI taxonomy Id: 397287
Other names: L. bacterium 28-4, Lachnospiraceae bacterium 28-4
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