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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C807_03779Hypothetical protein. (453 aa)    
Predicted Functional Partners:
C807_03778
Hypothetical protein.
       0.773
C807_03780
Hypothetical protein.
       0.714
C807_00486
Hypothetical protein.
    
 0.658
C807_00491
Hypothetical protein.
   
 
 0.621
C807_00552
Hypothetical protein.
    
  0.582
C807_03781
Beta-phosphoglucomutase.
  
    0.582
C807_01248
Hypothetical protein.
  
 
 0.508
C807_02137
Hypothetical protein.
  
 
 0.508
C807_01105
Hypothetical protein.
  
    0.478
mtaD
Hypothetical protein; Catalyzes the deamination of 5-methylthioadenosine and S- adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine. Belongs to the metallo-dependent hydrolases superfamily. MTA/SAH deaminase family.
  
    0.478
Your Current Organism:
Lachnospiraceae bacterium 284
NCBI taxonomy Id: 397287
Other names: L. bacterium 28-4, Lachnospiraceae bacterium 28-4
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