STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C807_03826Hypothetical protein. (74 aa)    
Predicted Functional Partners:
cinA
Competence/damage-inducible protein CinA domain; Belongs to the CinA family.
    
 0.644
nadE
NAD+ synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
    
 0.618
C807_03639
Hypothetical protein.
  
 
 0.566
C807_03815
Hypothetical protein.
    
 
 0.537
C807_02744
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
  
 
 0.529
C807_03825
Hypothetical protein.
       0.519
C807_02565
Hypothetical protein.
  
 
 0.466
C807_03075
Hypothetical protein.
  
     0.446
Your Current Organism:
Lachnospiraceae bacterium 284
NCBI taxonomy Id: 397287
Other names: L. bacterium 28-4, Lachnospiraceae bacterium 28-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.