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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C807_03963Hypothetical protein. (125 aa)    
Predicted Functional Partners:
C807_03964
Hypothetical protein.
 
     0.960
C807_03960
Hypothetical protein.
 
     0.943
C807_03961
Hypothetical protein.
 
     0.943
C807_03962
Phi13 family phage major tail protein.
 
     0.943
C807_03966
Phage tail tape measure protein, TP901 family, core region.
 
     0.891
C807_04034
Hypothetical protein.
 
     0.820
C807_04035
Hypothetical protein.
 
     0.815
C807_04036
Hypothetical protein.
 
     0.796
C807_04037
Hypothetical protein.
 
     0.796
C807_04038
Phi13 family phage major tail protein.
 
     0.796
Your Current Organism:
Lachnospiraceae bacterium 284
NCBI taxonomy Id: 397287
Other names: L. bacterium 28-4, Lachnospiraceae bacterium 28-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.