STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C807_04066Hypothetical protein. (543 aa)    
Predicted Functional Partners:
C807_04067
Hypothetical protein.
 
     0.946
C807_04065
Hypothetical protein.
 
     0.891
C807_04064
Hypothetical protein.
 
     0.877
C807_04063
Hypothetical protein.
 
     0.872
C807_00117
Hypothetical protein.
 
     0.793
C807_00123
Hypothetical protein.
 
     0.789
C807_02691
Hypothetical protein.
 
     0.789
C807_00122
Hypothetical protein.
 
     0.780
C807_02692
Hypothetical protein.
 
     0.778
C807_02697
Hypothetical protein.
  
     0.774
Your Current Organism:
Lachnospiraceae bacterium 284
NCBI taxonomy Id: 397287
Other names: L. bacterium 28-4, Lachnospiraceae bacterium 28-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.