STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C806_00127Hypothetical protein. (72 aa)    
Predicted Functional Partners:
C806_00128
Hypothetical protein.
       0.817
C806_00126
Hypothetical protein.
       0.791
C806_00125
Hypothetical protein.
       0.781
C806_00124
Hypothetical protein.
       0.722
C806_00129
Hypothetical protein.
       0.613
C806_00123
Tape measure domain-containing protein.
       0.440
C806_00121
Hypothetical protein.
       0.435
C806_00120
Hypothetical protein.
       0.433
C806_00122
Hypothetical protein.
       0.429
C806_00117
Hypothetical protein.
       0.424
Your Current Organism:
Lachnospiraceae bacterium 31
NCBI taxonomy Id: 397288
Other names: L. bacterium 3-1, Lachnospiraceae bacterium 3-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.