Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C806_00249Hypothetical protein. (389 aa)    
Predicted Functional Partners:
C806_03377
Siroheme synthase domain-containing protein.
  
 
 0.984
C806_00268
Precorrin-2 C20-methyltransferase; Belongs to the precorrin methyltransferase family.
 
 0.979
C806_00263
Hypothetical protein.
 
 
 0.970
C806_00264
precorrin-3B C17-methyltransferase.
 
 
 0.938
C806_00262
Precorrin-4 C11-methyltransferase.
 
 
 0.929
hemC
Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.
    
 0.917
C806_04513
Hypothetical protein.
 
 
0.910
C806_00250
Hypothetical protein.
 
     0.909
cbiD
Cobalamin biosynthesis protein CbiD; Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A.
 
  
 0.906
C806_00265
Precorrin-6x reductase.
 
  
 0.894
Your Current Organism:
Lachnospiraceae bacterium 31
NCBI taxonomy Id: 397288
Other names: L. bacterium 3-1, Lachnospiraceae bacterium 3-1
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