STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C806_00337Hypothetical protein. (343 aa)    
Predicted Functional Partners:
C806_04560
Hypothetical protein.
 
  
  0.800
C806_03810
Hypothetical protein.
 
 0.786
C806_04451
Diguanylate cyclase (GGDEF) domain-containing protein.
 
 0.738
C806_04043
Hypothetical protein.
  
     0.725
C806_04677
Hypothetical protein.
 
    0.674
C806_00336
Hypothetical protein.
   
   0.673
C806_03838
Diguanylate cyclase (GGDEF) domain-containing protein.
  
 
 0.647
C806_04452
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
   
   0.633
C806_01781
Pyruvate kinase; Belongs to the pyruvate kinase family.
    
  0.628
C806_00338
Hypothetical protein.
       0.616
Your Current Organism:
Lachnospiraceae bacterium 31
NCBI taxonomy Id: 397288
Other names: L. bacterium 3-1, Lachnospiraceae bacterium 3-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.