STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C806_00448RelB/DinJ family addiction module antitoxin. (91 aa)    
Predicted Functional Partners:
C806_02607
RelE/StbE family addiction module toxin.
 
 0.968
C806_04314
RelE/StbE family addiction module toxin.
 
 0.878
C806_01314
Hypothetical protein.
  
 0.840
C806_04622
Hypothetical protein.
  
 0.840
C806_00449
Hypothetical protein.
       0.773
C806_04424
Hypothetical protein.
 
  
 0.763
C806_02660
Hypothetical protein.
 
  
 0.755
C806_04759
Hypothetical protein.
  
  
 0.689
C806_04313
AbrB family transcriptional regulator.
 
  
 0.688
C806_04623
AbrB family transcriptional regulator.
 
  
 0.688
Your Current Organism:
Lachnospiraceae bacterium 31
NCBI taxonomy Id: 397288
Other names: L. bacterium 3-1, Lachnospiraceae bacterium 3-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.