Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C806_00460Hypothetical protein. (1044 aa)    
Predicted Functional Partners:
C806_00462
Hypothetical protein.
 
     0.948
C806_03952
Flagellar motor switch protein FliN.
  
 
 0.912
fliE
Flagellar hook-basal body complex protein FliE.
  
   0.878
guaA
GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP.
     
  0.869
C806_00461
Hypothetical protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
  
 
 0.842
C806_00653
Flagellar hook-associated protein 3.
  
 
 0.834
C806_02543
Hypothetical protein.
 
 0.813
C806_00477
Hypothetical protein.
  
   
 0.799
C806_00648
Flagellar biosynthesis anti-sigma factor FlgM.
  
 
 
 0.796
C806_03962
Hypothetical protein.
 
    0.790
Your Current Organism:
Lachnospiraceae bacterium 31
NCBI taxonomy Id: 397288
Other names: L. bacterium 3-1, Lachnospiraceae bacterium 3-1
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