STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C806_00511Hypothetical protein. (245 aa)    
Predicted Functional Partners:
C806_00510
Hypothetical protein.
 
     0.916
C806_00509
Hypothetical protein.
       0.670
C806_02895
Hypothetical protein.
  
     0.576
C806_00890
Hypothetical protein.
  
     0.540
cinA
Competence/damage-inducible protein CinA domain; Belongs to the CinA family.
    
 0.519
dinB
Hypothetical protein; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII.
       0.514
C806_04759
Hypothetical protein.
 
 
 0.513
C806_04452
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
    
  0.510
C806_00514
Hypothetical protein.
 
     0.475
C806_03951
Chemotaxis protein CheY.
    
  0.470
Your Current Organism:
Lachnospiraceae bacterium 31
NCBI taxonomy Id: 397288
Other names: L. bacterium 3-1, Lachnospiraceae bacterium 3-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.