STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C806_00516Hypothetical protein. (109 aa)    
Predicted Functional Partners:
C806_04452
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
    
 0.856
C806_02481
Hypothetical protein.
  
     0.587
C806_01762
Hypothetical protein.
  
     0.556
C806_02806
Hypothetical protein.
  
     0.556
C806_00514
Hypothetical protein.
 
     0.542
C806_04830
Hypothetical protein.
  
     0.512
C806_02819
Hypothetical protein.
  
     0.505
C806_04445
Hypothetical protein.
  
  
  0.477
nadE
NAD+ synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
    
  0.471
C806_00551
Hypothetical protein.
  
 
  0.456
Your Current Organism:
Lachnospiraceae bacterium 31
NCBI taxonomy Id: 397288
Other names: L. bacterium 3-1, Lachnospiraceae bacterium 3-1
Server load: medium (58%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.