Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C806_00839Hypothetical protein. (268 aa)    
Predicted Functional Partners:
C806_01463
Hypothetical protein.
  
 
  0.738
hemA
glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).
     
  0.599
C806_03373
Hypothetical protein; Belongs to the ALAD family.
     
  0.599
hemL
Glutamate-1-semialdehyde-2,1-aminomutase.
    
  0.551
C806_00838
Hypothetical protein.
       0.545
C806_00280
Propionaldehyde dehydrogenase.
    
 0.544
C806_02757
Hypothetical protein.
    
 0.544
C806_04128
Lactoylglutathione lyase.
 
  
 0.536
C806_01043
ferredoxin-NADP+ reductase.
    
  0.496
pyrK
Dihydroorotate dehydrogenase electron transfer subunit; Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD(+).
    
  0.496
Your Current Organism:
Lachnospiraceae bacterium 31
NCBI taxonomy Id: 397288
Other names: L. bacterium 3-1, Lachnospiraceae bacterium 3-1
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