Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C806_00867Hypothetical protein. (281 aa)    
Predicted Functional Partners:
C806_03964
Flagellar protein export ATPase FliI.
  
 
 0.906
flhB
Flagellar biosynthetic protein FlhB; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the type III secretion exporter family.
  
 
 0.806
C806_00475
Hypothetical protein.
  
  
 0.799
C806_00430
Hypothetical protein.
  
 
 0.751
C806_02555
Hypothetical protein.
  
 
 0.703
C806_00868
Hypothetical protein.
      
0.686
C806_00866
Hypothetical protein.
       0.648
C806_03952
Flagellar motor switch protein FliN.
  
  
 0.622
C806_04452
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
       0.510
C806_03943
Hypothetical protein.
     
  0.497
Your Current Organism:
Lachnospiraceae bacterium 31
NCBI taxonomy Id: 397288
Other names: L. bacterium 3-1, Lachnospiraceae bacterium 3-1
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