STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C806_00904Hypothetical protein. (176 aa)    
Predicted Functional Partners:
C806_00907
Hypothetical protein.
 
     0.882
C806_00905
Hypothetical protein.
 
     0.881
C806_00906
Hypothetical protein; Belongs to the 'phage' integrase family.
 
    0.879
C806_00908
Hypothetical protein.
 
     0.874
C806_04452
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
    
  0.855
C806_04792
Hypothetical protein.
  
     0.771
C806_04214
Hypothetical protein.
 
     0.770
C806_04215
Hypothetical protein; Belongs to the 'phage' integrase family.
  
    0.767
C806_04808
Hypothetical protein.
 
     0.762
C806_00930
Hypothetical protein.
 
     0.746
Your Current Organism:
Lachnospiraceae bacterium 31
NCBI taxonomy Id: 397288
Other names: L. bacterium 3-1, Lachnospiraceae bacterium 3-1
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.