STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C806_01004UDP-N-acetylglucosamine 4,6-dehydratase. (333 aa)    
Predicted Functional Partners:
C806_01013
UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
 
 
 0.973
C806_01005
Pseudaminic acid synthase.
 
  
 0.956
C806_01008
Hypothetical protein.
 
     0.910
C806_01819
Nucleotide sugar dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
  
 
 0.902
C806_01012
Pseudaminic acid biosynthesis-associated protein PseG.
 
   
 0.892
C806_01007
Hypothetical protein.
  
 
 0.859
C806_01003
Hypothetical protein.
 
   
 0.835
C806_01006
Hypothetical protein.
 
   
 0.824
C806_01790
Hypothetical protein.
  
 
 0.785
C806_01861
Hypothetical protein.
  
 
 0.785
Your Current Organism:
Lachnospiraceae bacterium 31
NCBI taxonomy Id: 397288
Other names: L. bacterium 3-1, Lachnospiraceae bacterium 3-1
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