STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C806_01026Hypothetical protein. (234 aa)    
Predicted Functional Partners:
C806_01025
Hypothetical protein.
       0.791
C806_01023
Hypothetical protein.
       0.752
C806_01024
Hypothetical protein.
       0.752
C806_00460
Hypothetical protein.
  
 
 0.658
C806_00559
Thioredoxin; Belongs to the thioredoxin family.
    
   0.638
C806_03756
Thioredoxin; Belongs to the thioredoxin family.
    
   0.638
C806_01027
Hypothetical protein.
       0.564
C806_01021
Hypothetical protein.
       0.535
C806_01020
Hypothetical protein.
       0.529
C806_01982
Calcium-translocating P-type ATPase, PMCA-type.
   
  
 0.527
Your Current Organism:
Lachnospiraceae bacterium 31
NCBI taxonomy Id: 397288
Other names: L. bacterium 3-1, Lachnospiraceae bacterium 3-1
Server load: medium (50%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.