STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C806_01045Hypothetical protein. (388 aa)    
Predicted Functional Partners:
C806_01046
L-serine dehydratase, iron-sulfur-dependent, beta subunit.
       0.773
C806_01047
L-serine dehydratase, iron-sulfur-dependent, alpha subunit.
       0.773
C806_00163
Desulfoferrodoxin.
 
  
 0.729
C806_04154
Rubredoxin.
 
 
 0.685
C806_01043
ferredoxin-NADP+ reductase.
 
     0.627
C806_01044
Glutamate synthase (NADPH), homotetrameric.
 
   
 0.602
C806_01671
Hemerythrin-like metal-binding domain-containing protein.
  
  
 0.532
C806_02378
Hemerythrin-like metal-binding domain-containing protein.
  
  
 0.532
C806_03058
Hemerythrin-like metal-binding domain-containing protein.
  
  
 0.532
C806_03810
Hypothetical protein.
    
  0.523
Your Current Organism:
Lachnospiraceae bacterium 31
NCBI taxonomy Id: 397288
Other names: L. bacterium 3-1, Lachnospiraceae bacterium 3-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.