Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C806_01072YegS//BmrU family lipid kinase. (319 aa)    
Predicted Functional Partners:
C806_00576
Hypothetical protein.
    
 0.709
C806_00575
Hypothetical protein.
    
  0.682
C806_02280
Hypothetical protein; Belongs to the CDS family.
    
 0.648
C806_02960
1-acylglycerol-3-phosphate O-acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.
    
 0.632
C806_01071
4-alpha-glucanotransferase.
       0.618
C806_03441
Hypothetical protein.
 
 
 0.613
C806_04070
Hypothetical protein.
   
 
  0.604
C806_01070
Hypothetical protein.
       0.583
C806_04386
Hypothetical protein.
     
  0.579
C806_01073
Stage IV sporulation protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat.
       0.565
Your Current Organism:
Lachnospiraceae bacterium 31
NCBI taxonomy Id: 397288
Other names: L. bacterium 3-1, Lachnospiraceae bacterium 3-1
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