STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C806_01079Stage III sporulation protein AA. (312 aa)    
Predicted Functional Partners:
C806_01080
Stage III sporulation protein AB.
 
  
 0.996
C806_01081
Stage III sporulation protein AC.
 
  
 0.989
C806_01082
Stage III sporulation protein AD.
 
  
 0.982
C806_01085
Stage III sporulation protein AG.
 
  
 0.976
C806_01083
Stage III sporulation protein AE.
 
  
 0.971
C806_01086
Hypothetical protein.
 
  
 0.918
C806_01073
Stage IV sporulation protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat.
 
  
 0.892
C806_01084
Stage III sporulation protein AF.
 
  
 0.861
C806_03314
Stage II sporulation protein R.
  
  
 0.843
C806_01912
Stage II sporulation protein E.
  
   
 0.827
Your Current Organism:
Lachnospiraceae bacterium 31
NCBI taxonomy Id: 397288
Other names: L. bacterium 3-1, Lachnospiraceae bacterium 3-1
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.