STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C806_01165Hypothetical protein. (529 aa)    
Predicted Functional Partners:
C806_03953
Flagellar motor switch protein FliM.
    
   0.775
C806_00416
Hypothetical protein.
  
 
 0.758
C806_04448
Hypothetical protein; Belongs to the multicopper oxidase YfiH/RL5 family.
    
  0.710
C806_01726
MTA/SAH nucleosidase; Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S-adenosylhomocysteine (SAH/AdoHcy) to adenine and the corresponding thioribose, 5'- methylthioribose and S-ribosylhomocysteine, respectively. Belongs to the PNP/UDP phosphorylase family. MtnN subfamily.
    
 0.709
C806_02684
Hypothetical protein.
    
  0.689
C806_03606
Hypothetical protein.
    
  0.689
C806_04762
Hypothetical protein.
    
  0.689
C806_04763
Hypothetical protein.
    
  0.689
C806_04806
Hypothetical protein.
    
  0.689
C806_01109
Diaminopimelate decarboxylase.
  
 0.639
Your Current Organism:
Lachnospiraceae bacterium 31
NCBI taxonomy Id: 397288
Other names: L. bacterium 3-1, Lachnospiraceae bacterium 3-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.