STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C806_01441Hypothetical protein. (194 aa)    
Predicted Functional Partners:
C806_01442
2-aminoethylphosphonate-pyruvate transaminase.
       0.714
C806_01440
Hypothetical protein; Belongs to the LysR transcriptional regulatory family.
 
   
 0.599
C806_02923
Hypothetical protein.
  
     0.513
C806_00843
Hypothetical protein.
 
     0.493
C806_03523
Hypothetical protein.
    
   0.491
C806_03939
Chemotaxis protein CheC.
    
   0.491
C806_03952
Flagellar motor switch protein FliN.
    
   0.491
C806_03257
Hypothetical protein.
  
     0.458
C806_03385
PTS system, mannitol-specific IIC component.
  
   
 0.452
C806_04126
Phosphoribosylformylglycinamidine synthase.
  
    0.434
Your Current Organism:
Lachnospiraceae bacterium 31
NCBI taxonomy Id: 397288
Other names: L. bacterium 3-1, Lachnospiraceae bacterium 3-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.