STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C806_01463Hypothetical protein. (322 aa)    
Predicted Functional Partners:
C806_01462
Hypothetical protein.
 
0.975
C806_04452
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
  
 
 0.957
C806_01465
Hypothetical protein.
 
0.931
C806_00280
Propionaldehyde dehydrogenase.
  
 0.880
C806_02757
Hypothetical protein.
  
 0.880
C806_04071
MIP family channel protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.
   
 
 0.786
C806_01461
Hypothetical protein.
 
  
 0.783
C806_04356
Hypothetical protein.
  
 
 0.780
C806_01467
Hypothetical protein.
 
 0.762
C806_04191
Phosphomethylpyrimidine kinase.
    
 0.761
Your Current Organism:
Lachnospiraceae bacterium 31
NCBI taxonomy Id: 397288
Other names: L. bacterium 3-1, Lachnospiraceae bacterium 3-1
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.