Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C806_01465Hypothetical protein. (284 aa)    
Predicted Functional Partners:
C806_01463
Hypothetical protein.
 
0.931
C806_01464
Hypothetical protein.
     0.904
C806_04128
Lactoylglutathione lyase.
   
 0.893
C806_01469
Hypothetical protein.
     0.889
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate.
   
 0.873
mgsA
Methylglyoxal synthase; Catalyzes the formation of methylglyoxal from dihydroxyacetone phosphate.
     
 0.863
C806_01462
Hypothetical protein.
 
  
 
0.850
C806_01046
L-serine dehydratase, iron-sulfur-dependent, beta subunit.
     
  0.847
C806_01047
L-serine dehydratase, iron-sulfur-dependent, alpha subunit.
     
  0.847
C806_01200
Threonine ammonia-lyase.
  
 
 0.847
Your Current Organism:
Lachnospiraceae bacterium 31
NCBI taxonomy Id: 397288
Other names: L. bacterium 3-1, Lachnospiraceae bacterium 3-1
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