STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C806_01488Hypothetical protein. (153 aa)    
Predicted Functional Partners:
C806_01491
Hypothetical protein.
 
     0.766
C806_04935
Hypothetical protein.
 
     0.699
C806_04973
Hypothetical protein.
 
     0.699
C806_01485
Phage/plasmid primase, P4 family domain-containing protein.
 
    0.611
C806_01487
Hypothetical protein.
 
     0.608
C806_01486
Hypothetical protein.
 
     0.607
C806_01489
Hypothetical protein.
       0.558
C806_01490
Hypothetical protein.
 
     0.496
C806_01484
Hypothetical protein.
 
     0.481
C806_01477
Hypothetical protein.
 
     0.430
Your Current Organism:
Lachnospiraceae bacterium 31
NCBI taxonomy Id: 397288
Other names: L. bacterium 3-1, Lachnospiraceae bacterium 3-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.